This report provides some overall description of the database search. Users can use this to quickly check the overal quality of the experiment
Peptide Sequences Identified in total: 31477
Avearge ms/ms identification rate(%): 32.73
Groups: KES; PBS; W
Groups: A; B
MS ID rate is a good repretation of the MS run quality. Raw files from Q-Exactive series should have roughly around 50% ms ID rate (Percentage of MSMS spectra identified as peptided, at a 1% FDR) for humane cell culture digest, and at least 20% for metaproteomics samples according to experience.
MS ID rate should also be well-reproduced across samples and groupings.
The overall performance for all raw files: